Bioinformatics Research Group

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Brona Brejova, Daniel G. Brown, Ming Li, and Tomas Vinar. ExonHunter: A Comprehensive Approach to Gene Finding. Web supplement ExonHunter is now available for download! Experiments for the ROSETTA data set developed by S. Batzoglou et. al. in 2000 [Pubmed] Sequences and reference annotation: Genbank format (sequences + annotation) 363kB (obtained here) Fasta format (sequeces only) 182kB , masked 160kB GTF format (annotation only) 63kB Exonhunter predictions (GTF format): Notation for sources of information: human H, mouse M, chicken C, Drosophila D; ESTs e, proteins p, genome g. With all information sources (r, He, Hp, Me, Mp, Mg, Cp, Dp, Dg): 69kB With non-human information sources (r, Me, Mp, Mg, Cp, Dp, Dg): 68kB Using repeat information only (r): 63kB

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